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780757-88-2 molecular structure
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(6S,9aS)-N-benzyl-6-[(4-hydroxyphenyl)methyl]-8-(naphthalen-1-ylmethyl)-4,7-dioxo-octahydro-1H-pyrimido[1,2-a]piperazine-1-carboxamide

ChemBase ID: 73162
Molecular Formular: C33H32N4O4
Molecular Mass: 548.63158
Monoisotopic Mass: 548.24235552
SMILES and InChIs

SMILES:
c1ccc(cc1)CNC(=O)N1[C@@H]2N(C(=O)CC1)[C@H](C(=O)N(C2)Cc1cccc2c1cccc2)Cc1ccc(cc1)O
Canonical SMILES:
Oc1ccc(cc1)C[C@H]1C(=O)N(C[C@H]2N1C(=O)CCN2C(=O)NCc1ccccc1)Cc1cccc2c1cccc2
InChI:
InChI=1S/C33H32N4O4/c38-27-15-13-23(14-16-27)19-29-32(40)35(21-26-11-6-10-25-9-4-5-12-28(25)26)22-30-36(18-17-31(39)37(29)30)33(41)34-20-24-7-2-1-3-8-24/h1-16,29-30,38H,17-22H2,(H,34,41)/t29-,30+/m0/s1
InChIKey:
HQWTUOLCGKIECB-XZWHSSHBSA-N

Cite this record

CBID:73162 http://www.chembase.cn/molecule-73162.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
(6S,9aS)-N-benzyl-6-[(4-hydroxyphenyl)methyl]-8-(naphthalen-1-ylmethyl)-4,7-dioxo-octahydro-1H-pyrimido[1,2-a]piperazine-1-carboxamide
IUPAC Traditional name
(6S,9aS)-N-benzyl-6-[(4-hydroxyphenyl)methyl]-8-(naphthalen-1-ylmethyl)-4,7-dioxo-tetrahydro-2H-pyrimido[1,2-a]piperazine-1-carboxamide
Synonyms
ICG-001
(6S,9aS)-Hexahydro-6-[(4-hydroxyphenyl)methyl]-8-(1-naphthalenylmethyl)-4,7-dioxo-N-(phenylmethyl)-2H-pyrazino[1,2-a]pyrimidine-1(6H)-carboxamide
(S,S)-ICG 001
CAS Number
780757-88-2
PubChem SID
162038082
PubChem CID
11238147

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID
PubChem 11238147 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
Acid pKa 9.503949  H Acceptors
H Donor LogD (pH = 5.5) 4.1237264 
LogD (pH = 7.4) 4.1203837  Log P 4.1237693 
Molar Refractivity 155.5013 cm3 Polarizability 61.18189 Å3
Polar Surface Area 93.19 Å2 Rotatable Bonds
Lipinski's Rule of Five false 

PROPERTIES

PROPERTIES

Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Storage Condition
-20°C expand Show data source
MSDS Link
Download expand Show data source
Target
Wnt expand Show data source
Salt Data
Free Base expand Show data source
Certificate of Analysis
Download expand Show data source

DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals TRC TRC
Selleck Chemicals - S2662 external link
Research Area
Description Cancer
Biological Activity
Description ICG-001 specifically binds to CBP with IC50 of 3 μM.
Targets CBP
IC50 3 μM [1]
In Vitro ICG-001 has no effect on the related reporter construct, FOPFLASH, which contains mutated TCF sites. After treatment with 25μM of ICG-001 for 8 hours, SW480 cell reduces the steady-state levels of Survivin and Cyclin D1 RNA and protein, both of which can be up-regulated by β-catenin. ICG-001 selectively induces apoptosis in transformed cells but not in normal colon cells, reduces in vitro growth of colon carcinoma cells. [1] ICG-001, can phenotypically rescue normal nerve growth factor (NGF) -induced neuronal differentiation and neurite outgrowth in the presenilin-1 mutant cells, emphasizing the importance of the TCF/β-catenin signaling pathway on neurite outgrowth and neuronal differentiation. [2] A recent study demonstrates that 5μM ICG-001 inhibits leptin-induced EMT, invasion and tumorsphere formation in MCF7 cells. [3]
In Vivo Administration of a water-soluble analog of ICG-001 for 9 weeks reduces the formation of colon and small intestinal polyps by 42% as effectively as the nonsteroidal antiinflammatory agent Sulindac, which has consistently demonstrated efficacy in this model. No overt toxicity is detected throughout the course of treatment. In the SW620 nude mouse xenograft model of tumor regression, 150 mg/kg, i.v. of analog demonstrates a dramatic reduction in tumor volume over the 19-day course of treatment, with no mortality or weight loss. [1] ICG-001 (5 mg/kg per day) significantly inhibits beta-catenin signaling and attenuates bleomycin-induced lung fibrosis in mice, while concurrently preserving the epithelium. [4]
Clinical Trials
Features
Combination Therapy
Description Administration of ICG-001 concurrent with bleomycin prevents fibrosis, and late administration is able to reverse established fibrosis and significantly improve survival. [4]
Protocol
Kinase Assay [1]
DUAL-Luciferase Reporter Assay The Dual-Luciferase Reporter (DLR) Assay System provides an efficient means of performing dual reporter assays. In the DLRTM Assay, the activities of firefly (Photinus pyralis) and Renilla (Renilla reniformis, also known as sea pansy) luciferases are measured sequentially from a single sample. The firefly luciferase reporter is measured first by adding Luciferase Assay Reagent II (LAR II) to generate a “glow-type” luminescent signal. After quantifying the firefly luminescence, this reaction is quenched, and the Renilla luciferase reaction is initiated by simultaneously adding Stop & Glo® Reagent to the same tube. The Stop & Glo® Reagent also produces a “glow-type” signal from the Renilla luciferase, which decays slowly over the course of the measurement. In the DLRTM Assay System, both reporters yield linear assays with subattomole (<10-18) sensitivities="" and="" no="" endogenous="" activity="" of="" either="" reporter="" in="" the="" experimental="" host="" cells.="" furthermore,="" the="" integrated="" format="" of="" the="">TM Assay provides rapid quantitation of both reporters either in transfected cells or in cell-free transcription/translation reactions.
Cell Assay [1]
Cell Lines Human colon carcinoma cell lines SW480, SW620, and HCT116, normal colonic epithelial cell line CCD-841Co
Concentrations ~25 μM
Incubation Time 24 hours
Methods 1. Prior to starting the assay, prepare the Apo-ONE? Caspase-3/7 Reagent, and mix thoroughly. 2. For best results, empirical determination of the optimal cell number, apoptosis induction treatment and incubation period for the cell culture system may be necessary.3. Use identical cell numbers and volumes for the assay and the negative control samples.4. Do not mix Apo-ONE? Caspase-3/7 Reagent and samples by manual pipetting. Mixing in this manner is unnecessary and may create bubbles that interfere with fluorescence readings or cross-contaminate the samples. Gentle mixing may be performed using a plate shaker.5. Total incubation time for the assay depends upon the amount ofcaspase- 3/7 present in the sample. 6. The Apo-ONE? Caspase-3/7 Reagent is formulated to mediate cellular lysis and support optimal caspase-3/7 activity. In rare instances, the reagent does not affect complete lysis of cultured cells. In such cases, lysis is enhanced by a freeze-thaw cycle. For best results, freeze at –70 °C, then thaw at room temperature. After equilibration, mix to homogeneity and incubate until measurable fluorescence is achieved.
Animal Study [1]
Animal Models Seven-week-old male C57BL/6J-Apc Min/+
Formulation Water-soluble analog of ICG-001 is used.
Doses 300 mg/kg
Administration Water-soluble analog of ICG-001 is treated orally for 9 weeks everyday.
References
[1] Emami KH, et al, Proc Natl Acad Sci USA, 2004, 101(34), 12682-12687.
[2] Teo JL, et al, Proc Natl Acad Sci USA, 2005,102(34),12171-12176.
[3] Yan D, et al, J Biol Chem, 2012, 287(11), 8598-8612.
[4] Henderson WR Jr, et al, Proc Natl Acad Sci USA, 2010, 107(32), 14309-14314.
Toronto Research Chemicals - I163800 external link
(S,S)-ICG 001 is a β-turn peptidomimetic molecule inhibitor of β-catenin-Tcf-mediated transcription.

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REFERENCES

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