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852475-26-4 molecular structure
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(2E)-3-{4-[(1E)-3-(3-fluorophenyl)-3-oxoprop-1-en-1-yl]-1-methyl-1H-pyrrol-2-yl}-N-hydroxyprop-2-enamide

ChemBase ID: 72706
Molecular Formular: C17H15FN2O3
Molecular Mass: 314.3110032
Monoisotopic Mass: 314.10667057
SMILES and InChIs

SMILES:
c1cc(cc(c1)C(=O)/C=C/c1cn(c(c1)/C=C/C(=O)NO)C)F
Canonical SMILES:
ONC(=O)/C=C/c1cc(cn1C)/C=C/C(=O)c1cccc(c1)F
InChI:
InChI=1S/C17H15FN2O3/c1-20-11-12(9-15(20)6-8-17(22)19-23)5-7-16(21)13-3-2-4-14(18)10-13/h2-11,23H,1H3,(H,19,22)/b7-5+,8-6+
InChIKey:
QRDAPCMJAOQZSU-KQQUZDAGSA-N

Cite this record

CBID:72706 http://www.chembase.cn/molecule-72706.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
(2E)-3-{4-[(1E)-3-(3-fluorophenyl)-3-oxoprop-1-en-1-yl]-1-methyl-1H-pyrrol-2-yl}-N-hydroxyprop-2-enamide
IUPAC Traditional name
(2E)-3-{4-[(1E)-3-(3-fluorophenyl)-3-oxoprop-1-en-1-yl]-1-methylpyrrol-2-yl}-N-hydroxyprop-2-enamide
Synonyms
3-[4-(3-(3-Fluorophenyl)-3-oxo-1-propen-1-yl)-1-methyl-1H-pyrrol-2-yl]-N-hydroxy-2-propenamide
MC 1568
MC1568
CAS Number
852475-26-4
PubChem SID
162037627
PubChem CID
11381449

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID
PubChem 11381449 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
Acid pKa 9.522503  H Acceptors
H Donor LogD (pH = 5.5) 2.6092637 
LogD (pH = 7.4) 2.60606  Log P 2.6093047 
Molar Refractivity 87.2151 cm3 Polarizability 31.666971 Å3
Polar Surface Area 71.33 Å2 Rotatable Bonds
Lipinski's Rule of Five true 

PROPERTIES

PROPERTIES

Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Storage Condition
-20°C expand Show data source
MSDS Link
Download expand Show data source
Target
HDAC expand Show data source
Salt Data
Free Base expand Show data source
Certificate of Analysis
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DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals TRC TRC
Selleck Chemicals - S1484 external link
Research Area
Description Cancer
Biological Activity
Description MC1568 is a selective HDAC inhibitor with IC50 of 220 nM.
Targets HDAC
IC50 220 nM [1]
In Vitro MC1568 is a selective class II (IIa) histone deacetylas (HDAC II) inhibitor with IC50 of 220 nM and 176-fold class II selectivity (against class I). In human breast cancer ZR-75.1 cell lysates, MC1568 (5 μM) shows no inhibitory activity against HDAC1 but is able to inhibit HDAC4. [1]In MCF-7 cells, MC1568 (20 μM) increases the accumulation of acetylated H3 and H4 histones, as well as the levels of acetyl-tubulin, which indicates a inhibitory effect of MC1568 on HDAC6. [2]In C2C12 cells, MC1568 (5 μM) arrests myogenesis by decreasing myocyte enhancer factor 2D (MEF2D) expression, stabilizing the HDAC4-HDAC3-MEF2D complex, and by inhibiting differentiation-induced MEF2D acetylation. [3]MC1568 (5 or 10 μM) interferes with the RAR- and PPARγ-mediated differentiation-inducing signaling pathways. In F9 cells, MC1568 specifically blocks endodermal differentiation despite not affecting retinoic acid-induced maturation of promyelocytic NB4 cells. In 3T3-L1 cells, MC1568 attenuates PPARγ-induced adipogenesis. [4]
In Vivo In mice, MC1568 (50 mg/kg) shows an apparent tissue-selective HDAC inhibition. In skeletal muscle and heart, MC1568 inhibits the activity of HDAC4 and HDAC5 without affecting HDAC3 activity, thereby leaving MEF2-HDAC complexes in a repressed state. [3]In reporting PPRE-Luc mice, MC1568 (50 mg/kg) impairs PPARγ signaling mostly in the heart and adipose tissues. [4]In a recent study of pancreatic explants, MC1568 enhances expression of Pax4, a key factor required for proper β-and δ-cell differentiation and amplifies endocrine β- and δ-cells. [5]
Clinical Trials
Features
Protocol
Kinase Assay [1]
Maize HD2, HD1-B, and HD1-A Enzyme Inhibition. The enzyme liberats tritiated acetic acid from the substrate, which is quantified by scintillation counting. IC50 values are results of triple determinations. A 50 μL sample of maize enzyme (at 30 °C) is incubated (30 min) with 10 μL of total [3H]acetate-prelabeled chicken reticulocyte histones (2 mg/mL). Reaction is stopped by addition of 50 μL of 1 M HCl/0.4 M acetate and 800 μL of ethyl acetate. After centrifugation (1×104 g, 5 min), an aliquot of 600 μL of the upper phase is counted for radioactivity in 3 mL of liquid scintillation cocktail. MC1568 is tested at a starting concentration of 40 μM, and active substances are diluted further. NaB, VPA, TSA, SAHA, 85 TPX, HC-toxin, and tubacin are used as the reference compounds, and blank solvents are used as negative controls.
Cell Assay [4]
Cell Lines 3T3-L1 cells
Concentrations ~10 μM, dissolved in DMSO
Incubation Time 8 days
Methods The 3T3-L1 cells are propagated and differentiated using a cocktail of isobutylmethylxanthine, dexamethasone, and insulin. From the second day post-confluence and throughout the differentiation period of 8 days, the 3T3-L1 cells are induced by: (1) no induction: at post-confluence and throughout the differentiation period of 8 days, the cells are incubated with DMSO or MC1568. (2) troglitazone: at post-confluence and throughout the differentiation period of 8 days, the cells are induced with 5 μM troglitazone, MC1568, or both. (3) rosiglitazone: at post-confluence and throughout the differentiation period of 8 days, the cells are incubated with 1?μM rosiglitazone and either DMSO or MC1568. (4) rosiglitazone and dexamethasone: at post-confluence, the cells received 1?μM of rosiglitazone and 390?ng/mL dexamethasone. Throughout the differentiation period of 8 days, the cells are induced with 1?μM of rosiglitazone and either DMSO or MC1568. All medium is renewed every second day.
Animal Study [4]
Animal Models PPRE-Luc transgenic mouse (C57BL/6)
Formulation Dissolved in water solution of 0.5% carbossimetilcellulose
Doses 50 mg/kg
Administration By gavage once a day
References
[1] Mai A, et al. J Med Chem, 2005, 48(9), 3344-3353.
[2] Duong V, et al. Mol Cancer Res, 2008, 6(12), 1908-1919.
[3] Nebbioso A, et al. EMBO Rep, 2009, 10(7), 776-782.
[4] Nebbioso A, et al. J Mol Endocrinol, 2010, 45(4), 219-228.
[5] Lenoir O, et al. Diabetes, 2011, 60(11), 2861-2871.
Toronto Research Chemicals - M199250 external link
A selective class II (IIa) histone deacetylase (HDAC II) inhibitor. It exhibits tissue-selective inhibition between members of class II acetylases in vivo, particularly in skeletal muscle and the heart. It arrests myogenesis through the stabilization of m

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