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341031-54-7 molecular structure
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(2S)-2-hydroxybutanedioic acid; N-[2-(diethylamino)ethyl]-5-{[(3Z)-5-fluoro-2-oxo-2,3-dihydro-1H-indol-3-ylidene]methyl}-2,4-dimethyl-1H-pyrrole-3-carboxamide

ChemBase ID: 72476
Molecular Formular: C26H33FN4O7
Molecular Mass: 532.5612232
Monoisotopic Mass: 532.23332764
SMILES and InChIs

SMILES:
c1(ccc2c(c1)/C(=C/c1[nH]c(c(c1C)C(=O)NCCN(CC)CC)C)/C(=O)N2)F.C(=O)(C[C@@H](C(=O)O)O)O
Canonical SMILES:
OC(=O)C[C@@H](C(=O)O)O.CCN(CCNC(=O)c1c(C)[nH]c(c1C)/C=C/1\C(=O)Nc2c1cc(F)cc2)CC
InChI:
InChI=1S/C22H27FN4O2.C4H6O5/c1-5-27(6-2)10-9-24-22(29)20-13(3)19(25-14(20)4)12-17-16-11-15(23)7-8-18(16)26-21(17)28;5-2(4(8)9)1-3(6)7/h7-8,11-12,25H,5-6,9-10H2,1-4H3,(H,24,29)(H,26,28);2,5H,1H2,(H,6,7)(H,8,9)/b17-12-;/t;2-/m.0/s1
InChIKey:
LBWFXVZLPYTWQI-IPOVEDGCSA-N

Cite this record

CBID:72476 http://www.chembase.cn/molecule-72476.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
(2S)-2-hydroxybutanedioic acid; N-[2-(diethylamino)ethyl]-5-{[(3Z)-5-fluoro-2-oxo-2,3-dihydro-1H-indol-3-ylidene]methyl}-2,4-dimethyl-1H-pyrrole-3-carboxamide
(2S)-2-hydroxybutanedioic acid; N-[2-(diethylamino)ethyl]-5-[(5-fluoro-2-oxo-2,3-dihydro-1H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide
IUPAC Traditional name
(-)-malic acid; sunitinib
Synonyms
Sutent
SU-11248
Sunitinib Malate
N-[2-(Diethylamino)ethyl]-5-[(Z)-(5-fluoro-1,2-dihydro-2-oxo-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide (2S)-2-hydroxybutanedioic acid (1:1) salt
SU 011248
SU 11248
SU112248
Sunitinib malate
N-[2-(Diethylamino)ethyl]-5-[(Z)-(5-fluoro-1,2-dihydro-2-oxo-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide Malate
CAS Number
341031-54-7
MDL Number
MFCD08282795
PubChem SID
162037401
PubChem CID
6456015

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID
PubChem 6456015 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
Acid pKa 11.462899  H Acceptors
H Donor LogD (pH = 5.5) -0.2940416 
LogD (pH = 7.4) 1.2792807  Log P 2.9273767 
Molar Refractivity 116.2663 cm3 Polarizability 42.123272 Å3
Polar Surface Area 77.23 Å2 Rotatable Bonds 10 
Lipinski's Rule of Five false 

PROPERTIES

PROPERTIES

Physical Property Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Solubility
DMSO expand Show data source
DMSO: >10 mg/mL expand Show data source
Methanol expand Show data source
Apperance
powder expand Show data source
Yellow Solid expand Show data source
Melting Point
189-191°C expand Show data source
Storage Condition
-20°C expand Show data source
-20°C Freezer expand Show data source
European Hazard Symbols
Toxic Toxic (T) expand Show data source
MSDS Link
Download expand Show data source
Download expand Show data source
German water hazard class
2 expand Show data source
Risk Statements
61-2-48/25 expand Show data source
Safety Statements
53-22-36/37 expand Show data source
GHS Pictograms
GHS08 expand Show data source
GHS Signal Word
Danger expand Show data source
GHS Hazard statements
H360-H372 expand Show data source
GHS Precautionary statements
P201-P308 + P313 expand Show data source
Storage Temperature
room temp expand Show data source
Target
c-Kit expand Show data source
Flt expand Show data source
PDGFR expand Show data source
VEGFR expand Show data source
Purity
≥98% (HPLC) expand Show data source
Salt Data
Malate expand Show data source
Certificate of Analysis
Download expand Show data source
Empirical Formula (Hill Notation)
C22H27FN4O2 · C4H6O5 expand Show data source

DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals Sigma Aldrich Sigma Aldrich TRC TRC
Selleck Chemicals - S1042 external link
Research Area
Description Cancer
Biological Activity
Description Sunitinib Malate (Sutent, SU11248) is a potent RTK inhibitor targeting VEGFR2 (Flk-1) and PDGFRβ with IC50 of 80 nM and 2 nM, respectively.
Targets VEGFR2 (Flk-1) PDGFRβ
IC50 80 nM 2 nM [1]
In Vitro Sunitinib also potently inhibits Kit and FLT-3. [1] Sunitinib is a potent ATP-competitive inhibitor of VEGFR2 (Flk1) and PDGFRβ with Ki of 9 nM and 8 nM, respectively, displaying >10-fold higher selectivity for VEGFR2 and PDGFR than FGFR-1, EGFR, Cdk2, Met, IGFR-1, Abl, and src. In serum-starved NIH-3T3 cells expressing VEGFR2 or PDGFRβ, Sunitinib inhibits VEGF-dependent VEGFR2 phosphorylation and PDGF-dependent PDGFRβ phosphorylation with IC50 of 10 nM and 10 nM, respectively. Sunitinib inhibits VEGF-induced proliferation of serum-starved HUVECs with IC50 of 40 nM, and inhibits PDGF-induced proliferation of NIH-3T3 cells overexpressing PDGFRβ or PDGFRα with IC50 of 39 nM and 69 nM, respectively. [2] Sunitinib inhibits phosphorylation of wild-type FLT3, FLT3-ITD, and FLT3-Asp835 with IC50 of 250 nM, 50 nM, and 30 nM, respectively. Sunitinib inhibits the proliferation of MV4;11 and OC1-AML5 cells with IC50 of 8 nM and 14 nM, respectively, and induces apoptosis in a dose-dependent manner. [3]
In Vivo Consistent with the substantial and selective inhibition of VEGFR2 or PDGFR phosphorylation and signaling in vivo, Sunitinib (20-80 mg/kg/day) exhibits broad and potent dose-dependent anti-tumor activity against a variety of tumor xenograft models including HT-29, A431, Colo205, H-460, SF763T, C6, A375, or MDA-MB-435. Sunitinib dosing at 80 mg/kg/day for 21 days leads to complete tumor regression in six of eight mice, without tumor re-growing during a 110-day observation period after the end of treatment. Second round of treatment with Sunitinib remains efficacious against tumors that are not fully regressed during the first round of treatment. Sunitinib treatment results in significant decrease in tumor MVD, with ~40% reduction in SF763T glioma tumors. SU11248 treatment results in a complete inhibition of additional tumor growth of luciferase-expressing PC-3M xenografts, despite no reduction in tumor size. [2] Sunitinib treatment (20 mg/kg/day) dramatically suppresses the growth subcutaneous MV4;11 (FLT3-ITD) xenografts and prolongs survival in the FLT3-ITD bone marrow engraftment model. [3]
Clinical Trials A Phase I/II study of Sunitinib in young patients with advanced gastrointestinal stromal tumor is currently ongoing.
Features
Combination Therapy
Description Sunitinib in combination with docetaxel, 5-FU, or doxorubicin significantly enhances growth inhibition of MX-1 Tumors. Sunitinib enhances docetaxel-induced tumor growth delay in 435/HAL-Luc breast carcinoma growth in the bone. [4] Sunitinib in combination with the conventional anticancer agent cytarabine or daunorubicin displays synergistic inhibitory effect on the proliferation and survival of FLT3 ITD-positive MV4-11 and MOLM14 leukemic cells. [5] Rapamycin analogue RAD001 (100 nM) enhances the ability of Sunitinib (2-4 nM) to inhibit the proliferation of MV4-11, EOL-1, Kasumi, KU812, K562, and PALL-2 cells and down-regulate levels of mammalian target of rapamycin effectors p70 S6 kinase and eukaryotic initiation factor 4E–binding protein. [6] A Phase I/II study of Sunitinib plus paclitaxel and carboplatin as neoadjuvant treatment for locally advanced breast cancer is currently ongoing.
Protocol
Kinase Assay [1]
Biochemical Tyrosine Kinase Assays IC50 values for Sunitinib against VEGFR2 (Flk-1) and PDGFRβ are determined using glutathione S-transferasefusion proteins containing the complete cytoplasmic domain of the RTK. Biochemical tyrosine kinase assays to quantitate the trans-phosphorylation activity of VEGFR2 (Flk-1) and PDGFRβ are performed in 96-well microtiter plates precoated (20 μg/well in PBS; incubated overnight at 4 °C) with the peptide substrate poly-Glu,Tyr (4:1). Excess protein binding sites are blocked with the addition of 1-5% (w/v) BSA in PBS. Purified GST-fusion proteins are produced in baculovirus-infected insect cells. GST-VEGFR2 and GST-PDGFRβ are then added to the microtiter wells in 2 × concentration kinase dilution buffer consisting of 100 mM HEPES, 50 mM NaCl, 40 μM NaVO4, and 0.02% (w/v) BSA. The final enzyme concentration for GST-VEGFR2 or GST-PDGFRβ is 50 ng/mL. Twenty-five μL of diluted Sunitinib are subsequently added to each reaction well to produce a range of inhibitor concentrations appropriate for each enzyme. The kinase reaction is initiated by the addition of different concentrations of ATP in a solution of MnCl2 so that the final ATP concentrations spanned the Km for the enzyme, and the final concentration of MnCl2 is 10 mM. The plates are incubated for 5-15 minutes at room temperature before stopping the reaction with the addition of EDTA. The plates are then washed three times with TBST. Rabbit polyclonal antiphosphotyrosine antisera are added to the wells at a 1:10,000 dilution in TBST containing 0.5% (w/v) BSA, 0.025% (w/v) nonfat dry milk, and 100 μM NaVO4 and incubated for 1 hour at 37 °C. The plates are then washed three times with TBST, followed by the addition of goat antirabbit antisera conjugated with horseradish peroxidase (1:10,000 dilution in TBST). The plates are incubated for 1 hour at 37 °C and then washed three times with TBST. The amount of phosphotyrosine in each well is quantitated after the addition of 2,2′-azino-di-[3-ethylbenzthiazoline sulfonate] as substrate.
Cell Assay [3]
Cell Lines RS4;11, MV4;11, and OC1-AML5
Concentrations Dissolved in DMSO, final concentrations ~10 μM
Incubation Time 24 and 48 hours
Methods Cells are starved overnight in medium containing 0.1% FBS prior to addition of Sunitinib and FL (50 ng/mL; FLT3-WT cells only). Proliferation is measured after 48 hours of culture using the Alamar Blue assay or trypan blue cell viability assays. Apoptosis is measured 24 hours after Sunitinib addition by Western blotting to detect cleavage of poly (ADP-ribose) polymerase (PARP) or levels of caspase-3.
Animal Study [2]
Animal Models Female nu/nu mice implanted s.c. with HT-29, A431, Colo205, H-460, SF763T, C6, A375, or MDA-MB-435, and male nu/nu mice bearing luciferase-expressing PC-3M tumors
Formulation Formulated as a carboxymethyl cellulose suspension or as a citrate buffered (pH 3.5) solution
Doses ~80 mg/kg
Administration Orally once daily
References
[1] Sun L, et al. J Med Chem, 2003, 46(7), 1116-1119.
[2] Mendel DB, et al. Clin Cancer Res, 2003, 9(1), 327-337.
[3] O'Farrell AM, et al. Blood, 2003, 101(9), 3597-3605.
[4] Abrams TJ, et al. Mol Cancer Ther, 2003, 2(10), 1011-1021.
[5] Yee KW, et al. Blood, 2004, 104(13), 4202-4209.
[6] Ikezoe T, et al. Mol Cancer Ther, 2006, 5(10), 2522-2530.
Sigma Aldrich - PZ0012 external link
Biochem/physiol Actions
Sunitinib malate is a receptor tyrosine kinase inhibitor, which targets VEGF-R1, VEGF-R2, VEGF-R3, PDGF-Rα, PDGF-Rβ, KIT, FLT3, CSF-1R, and RET. Sunitinib malate is an anticancer drug.
Legal Information
Sold for research purposes under agreement from Pfizer Inc.
Toronto Research Chemicals - S820000 external link
A multi-kinase inhibitor targeting several receptor tyrosine kinases (RTK). Antineoplastic.

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