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49843-98-3 molecular structure
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6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide

ChemBase ID: 72737
Molecular Formular: C13H13ClN2O
Molecular Mass: 248.70812
Monoisotopic Mass: 248.07164073
SMILES and InChIs

SMILES:
[nH]1c2c(c3c1ccc(c3)Cl)CCCC2C(=O)N
Canonical SMILES:
NC(=O)C1CCCc2c1[nH]c1c2cc(cc1)Cl
InChI:
InChI=1S/C13H13ClN2O/c14-7-4-5-11-10(6-7)8-2-1-3-9(13(15)17)12(8)16-11/h4-6,9,16H,1-3H2,(H2,15,17)
InChIKey:
FUZYTVDVLBBXDL-UHFFFAOYSA-N

Cite this record

CBID:72737 http://www.chembase.cn/molecule-72737.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide
IUPAC Traditional name
6-chloro-2,3,4,9-tetrahydro-1H-carbazole-1-carboxamide
Synonyms
SEN0014196
EX527
EX 527
6-Chloro-2,3,4,9-tetrahydro-1H-Carbazole-1-carboxamide
EX-527
CAS Number
49843-98-3
MDL Number
MFCD03009471
PubChem SID
162037658
PubChem CID
5113032

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID
PubChem 5113032 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
Acid pKa 15.208125  H Acceptors
H Donor LogD (pH = 5.5) 2.4641097 
LogD (pH = 7.4) 2.4641097  Log P 2.4641097 
Molar Refractivity 67.3711 cm3 Polarizability 26.996405 Å3
Polar Surface Area 58.88 Å2 Rotatable Bonds
Lipinski's Rule of Five true 

PROPERTIES

PROPERTIES

Physical Property Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Solubility
DMSO: >20 mg/mL expand Show data source
Apperance
white to off-white powder expand Show data source
Storage Condition
-20°C expand Show data source
European Hazard Symbols
Harmful Harmful (Xn) expand Show data source
UN Number
2811 expand Show data source
MSDS Link
Download expand Show data source
German water hazard class
3 expand Show data source
Hazard Class
6.1 expand Show data source
Packing Group
3 expand Show data source
Risk Statements
22-36 expand Show data source
Safety Statements
26 expand Show data source
GHS Pictograms
GHS06 expand Show data source
GHS Signal Word
Danger expand Show data source
GHS Hazard statements
H301-H319 expand Show data source
GHS Precautionary statements
P301 + P310-P305 + P351 + P338 expand Show data source
RID/ADR
UN 2811 6.1/PG 3 expand Show data source
Storage Temperature
2-8°C expand Show data source
Target
SIRT expand Show data source
Purity
≥98% (HPLC) expand Show data source
Salt Data
Free Base expand Show data source
Empirical Formula (Hill Notation)
C13H13ClN2O expand Show data source

DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals Sigma Aldrich Sigma Aldrich
Selleck Chemicals - S1541 external link
Biological Activity
Description EX 527 is a potent and selective SIRT1 inhibitor with IC50 of 38 nM.
Targets SIRT1
IC50 38 nM [1]
In Vitro EX 527 exhibits potently inhibitory effect against SIRT1 deacetylase activity in a concentration-dependent manner with an IC50 of 38 nM, displays much lower activity against SIRT2 and SIRT3 with IC50 values of 19.6 μM and 48.7 μM, respectively. EX 527 does not inhibit SIRT4-7 and class I/II HDAC activity at concentrations up to 100 μM. EX-527 alone (1 μM) has no detectable effect on the acetylation of p53 lysine 382 in NCI-H460 cells. EX-527 significantly increases the amount of acetylated p53 in NCI-H460 cells, human mammary epithelial cells, U-2 OS and MCF-7 cells subjected to genotoxic agents such as Etoposide, Doxorubicin, Hydroxyurea, and Hydrogen peroxide, which is more effective than that caused by Nicotinamide (5 mM). But surprisingly EX 527 does not result in detectable effects on p53-controled gene expression, cell survival, or cell proliferation. [1] EX 527 causes a 90% increase in cell number of HCT116 cells after 7 days in the condition of 0.1% serum but not 10% serum, suggesting that SIRT1 is a significant regulator of cell proliferation during growth factor deprivation conditions. [2] EX 527 abrogates resveratrol effects on glucose responses, and prevents resveratrol-induced up-regulation of Glut2, glucokinase, Pdx-1, and Tfam in INS-1E Cells, due to the opposite effect of EX 527 and resveratrol on SIRT1 deacetylase activity. [3]
In Vivo Administration of EX 527 (~10 μg) to rats increases hypothalamic acetyl-p53 levels by inhibiting hypothalamic SIRT1 activity. Co-administration of EX 527 with ghrelin markedly blunts the orexigenic action of ghrelin by decreasing the pAMPK levels, increasing the ACC levels, and abolishing the higher expression of the transcription factors FoxO1, pCREB, and Bsx and the neuropeptides NPY and AgRP in the hypothalamic arcuate nucleus. [4]
Clinical Trials
Features EX 527 has more potency, specificity, stability, and lower toxicity than other inhibitors of SIRT1 catalytic activity identified to date.
Protocol
Kinase Assay [1]
Inhibition of GST-SIRT1 deacetylase activity 293T cells are transiently transfected with GST-tagged human SIRT1 in the pDEST27 Gateway vector using FuGENE-6. After 48 hours, the cells are lysed with 50 mM Tris, pH 8.0, 120 mM NaCl, 1 mM EDTA, and 0.5% Nonidet P-40, supplemented with Complete Mini protease inhibitor cocktail tablets. GST-SIRT1 is purified from lysates using glutathione-Sepharose beads and washed extensively in the above buffer. The deacetylation assay is performed with approximately 30 ng of GST-SIRT1 in the presence of EX 527 (48 pM to 100 μM). Deacetylation is measured using the Fluor de Lys kit using a fluorogenic peptide encompassing residues 379 to 382 of p53, acetylated on lysine 382. The acetylated lysine residue is coupled to an aminomethylcoumarin moiety. The peptide is deacetylated by SIRT1, followed by the addition of a proteolytic developer that releases the fluorescent aminomethylcoumarin. Briefly, enzyme preparations are incubated with 170 μM NAD+ and 100 μM p53 fluorogenic peptide for 45 minutes at 37 °C followed by incubation in developer for 15 minutes at 37 °C. Fluorescence is measured by excitation at 360 nm and emission at 460 nm and enzymatic activity is expressed in relative fluorescence units.
Cell Assay [1]
Cell Lines NCI-H460, MCF-7, U-2 OS and HMEC
Concentrations Dissolved in DMSO, final concentration 1 μM
Incubation Time 48 or 72 hours
Methods For viability assays, cells are treated with EX 527 for 48 hours. Cell viability is then determined using the Cell Titer-Glo luminescent assay, which measures total ATP level as an index of cell number. Luminescence is measured on a Luminoskan Ascent. For the proliferation assay, 0.5 μCi/mL of [14C]thymidine is added to the medium immediately after EX 527. Plates are counted at 48 hours (HMEC) or 72 hours (NCI-H460, MCF-7, and U-2 OS cells) in a Microbeta liquid scintillation counter. Thymidine incorporated by the cells is detected by proximity to the scintillant in the base of the Cytostar-T tissue culture plate.
Animal Study [4]
Animal Models Male Sprague-Dawley rats
Formulation Dissolved in DMSO in a total volume of 5 μL
Doses ~5 μg/rat
Administration Intracerebroventricular injection
References
[1] Solomon JM, et al. Mol Cell Biol, 2006, 26(1), 28-38.
[2] Kabra N, et al. J Biol Chem, 2009, 284(27), 18210-18217.
[3] Vetterli L, et al. J Biol Chem, 2011, 286(8), 6049-6060.
[4] Velásquez DA, et al. Diabetes, 2011, 60(4), 1177-1185.
Sigma Aldrich - E7034 external link
Biochem/physiol Actions
Potent SIRT1 inhibitor, IC50 38 nM. More potent and selective than our current SIRT inhibitors. 200-500-fold more selective for SIRT1 than for SIRT2 or SIRT3. Does not inhibit SIRT4-7, does not inhibit class I/II HDAC activity at concentrations up to 100uM. Enhances p53 acetylation in response to DNA damaging agents. Mentioned in several reviews as well as recent Oncogene paper. EX-527 was identified in a high throughput screen. It is racemic and gives similar results and potency as the active isomer, EX-243, whereas the other isomer (designated EX-242) is inactive.

PATENTS

PATENTS

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INTERNET

INTERNET

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