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1094614-84 molecular structure
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(3Z)-3-[({3-[(dimethylamino)methyl]phenyl}amino)(phenyl)methylidene]-N-methyl-2-oxo-2,3-dihydro-1H-indole-6-carboxamide

ChemBase ID: 72729
Molecular Formular: C26H26N4O2
Molecular Mass: 426.51024
Monoisotopic Mass: 426.20557609
SMILES and InChIs

SMILES:
c1c(cc2c(c1)/C(=C(/Nc1cc(ccc1)CN(C)C)\c1ccccc1)/C(=O)N2)C(=O)NC
Canonical SMILES:
CNC(=O)c1ccc2c(c1)NC(=O)/C/2=C(/c1ccccc1)\Nc1cccc(c1)CN(C)C
InChI:
InChI=1S/C26H26N4O2/c1-27-25(31)19-12-13-21-22(15-19)29-26(32)23(21)24(18-9-5-4-6-10-18)28-20-11-7-8-17(14-20)16-30(2)3/h4-15,28H,16H2,1-3H3,(H,27,31)(H,29,32)/b24-23-
InChIKey:
BQNHHYZMVCQLJG-VHXPQNKSSA-N

Cite this record

CBID:72729 http://www.chembase.cn/molecule-72729.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
(3Z)-3-[({3-[(dimethylamino)methyl]phenyl}amino)(phenyl)methylidene]-N-methyl-2-oxo-2,3-dihydro-1H-indole-6-carboxamide
IUPAC Traditional name
(3Z)-3-[({3-[(dimethylamino)methyl]phenyl}amino)(phenyl)methylidene]-N-methyl-2-oxo-1H-indole-6-carboxamide
Synonyms
BIX 02188
CAS Number
1094614-84
PubChem SID
162037650
PubChem CID
23507698

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID Price
Selleck Chemicals
S1530 external link Add to cart Please log in.
Data Source Data ID
PubChem 23507698 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
Acid pKa 10.89088  H Acceptors
H Donor LogD (pH = 5.5) -0.23611705 
LogD (pH = 7.4) 1.3600281  Log P 2.8704233 
Molar Refractivity 132.1319 cm3 Polarizability 48.268887 Å3
Polar Surface Area 73.47 Å2 Rotatable Bonds
Lipinski's Rule of Five true 

PROPERTIES

PROPERTIES

Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Storage Condition
-20°C expand Show data source
Target
MEK expand Show data source
Salt Data
Free Base expand Show data source

DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals
Selleck Chemicals - S1530 external link
Research Area
Description Cancer
Biological Activity
Description BIX02188 is a selective inhibitor of MEK5 with IC50 of 4.3 nM.
Targets MEK5
IC50 4.3 nM [1]
In Vitro BIX02188 significantly blocks MEK5 catalytic activity with IC50 of 4.3 nM and inhibits ERK5 catalytic activity with IC50 of 0.83 μM. It shows no activity against closely related kinases MEK1, MEK2, ERK1, p38α, JNK2, TGFβR1, EGFR, and STK16 with IC50 values of 1.8 μM for TGFβR1, 3.9 μM for p38α, and >6.3 μM for other kinases. Pretreatment with BIX02188 inhibits sorbitol-induced phosphorylation of ERK5 in HeLa cells in a dose dependent manner and displays no inhibitory activity against the phosphorylation of ERK1/2, p38, and JNK1/2 MAPKs. BIX02188 treatment alone for 24 hours in HeLa or HEK293 cells does not show any cytotoxic effect. BIX02188 inhibits transcriptional activation of MEF2C through the MEK5/ERK5 signaling cascade in active MEK5/ERK5/MEF2C-driven luciferase expression system in HeLa and HEK293 cells with IC50 values of 1.15 μM and 0.82 μM, respectively. [1] BIX02188 also inhibits phosphorylation of BMK1 in bovine lung microvascular endothelial cells (BLMECs) which are stimulated with 300 μM H2O2, in a dose-dependent manner, with IC50 of 0.8 μM, specifically by blocking the MEK5 signal pathway. BIX02188 completely reverses the inhibitory effect on TNF-mediation; JNK activation had a similar effect on BMK1 inhibition, suggesting that it inhibits TNF signaling through activation of the MEK5-BMK1 signaling pathway. [2]
In Vivo
Clinical Trials
Features
Protocol
Kinase Assay [1]
Catalytic assay MEK5 protein isolated from a baculovirus expression system is used to measure kinase activity utilizing PKLight ATP Detection Reagent. The assay is performed using 15 nM GST-MEK5 and 0.75 μM ATP in assay buffer consisting of 25 mM Hepes, pH 7.5, 10 mM MgCl2, 50 mM KCl, 0.2% BSA, 0.01% CHAPS, 100 μM Na3VO4, 0.5 mM DTT and 1% DMSO in the presence of varying concentrations of BIX02188. The kinase reaction mixture is incubated for 90 minutes at room temperature followed by addition of 10 μL of an ATP detection reagent for 15 minutes. The relative light unit (RLU) signal is measured and the RLU signals are converted to percent of control (POC) values for the determination of IC50 value.
Cell Assay [1]
Cell Lines HeLa cells
Concentrations Dissolved in DMSO, final concentration ~10 μM
Incubation Time Pretreatment for 1.5 hours
Methods The cells are serum starved for 20 hours prior to stimulation with sorbitol at a final concentration of 0.4 M for 20 minutes at 37 °C. BIX02188 is added 1.5 hours prior to the addition of sorbitol. The cells are harvested and lysed in 50 μL RIPA buffer containing Halt protease and phosphate inhibitors at 4 °C for 5-10 minutes. The lysates are centrifuged for 10 minutes at 14,000 rpm and 50 μL lysate is added to 50 μl 2× sample buffer and boiled for 4 minutes at 95 °C. A 20 μl sample is run on SDS–PAGE 10% Tris-glycine gels and transferred to nitrocellulose. Western blotting is done with appropriate antibodies.
References
[1] Tatake RJ, et al. Biochem Biophys Res Commun, 2008, 377(1), 120-125.
[2] Li L, et al. Biochem Biophys Res Commun, 2008, 370(1), 159-163.

REFERENCES

REFERENCES

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PATENTS

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