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553-21-9 molecular structure
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(3aS,11aR)-6,10-dimethyl-3-methylidene-2H,3H,3aH,4H,5H,8H,9H,11aH-cyclodeca[b]furan-2-one

ChemBase ID: 72623
Molecular Formular: C15H20O2
Molecular Mass: 232.3181
Monoisotopic Mass: 232.14632988
SMILES and InChIs

SMILES:
C1CC(=C[C@@H]2[C@@H](CCC(=C1)C)C(=C)C(=O)O2)C
Canonical SMILES:
CC1=C[C@H]2OC(=O)C(=C)[C@@H]2CCC(=CCC1)C
InChI:
InChI=1S/C15H20O2/c1-10-5-4-6-11(2)9-14-13(8-7-10)12(3)15(16)17-14/h5,9,13-14H,3-4,6-8H2,1-2H3/b10-5+,11-9+/t13-,14+/m0/s1
InChIKey:
HRYLQFBHBWLLLL-AHNJNIBGSA-N

Cite this record

CBID:72623 http://www.chembase.cn/molecule-72623.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
(3aS,11aR)-6,10-dimethyl-3-methylidene-2H,3H,3aH,4H,5H,8H,9H,11aH-cyclodeca[b]furan-2-one
IUPAC Traditional name
costunolide
Synonyms
Costunolide
CAS Number
553-21-9
PubChem SID
162037548
PubChem CID
6436243

DATA SOURCES

DATA SOURCES

All Sources Commercial Sources Non-commercial Sources
Data Source Data ID Price
Selleck Chemicals
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Data Source Data ID
PubChem 6436243 external link

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem
H Acceptors H Donor
LogD (pH = 5.5) 3.8161666  LogD (pH = 7.4) 3.8161666 
Log P 3.8161666  Molar Refractivity 69.9464 cm3
Polarizability 26.945713 Å3 Polar Surface Area 26.3 Å2
Rotatable Bonds Lipinski's Rule of Five true 

PROPERTIES

PROPERTIES

Safety Information Pharmacology Properties Product Information Bioassay(PubChem)
Storage Condition
-20°C expand Show data source
Target
Telomerase expand Show data source
Salt Data
Free Base expand Show data source

DETAILS

DETAILS

Selleck Chemicals Selleck Chemicals
Selleck Chemicals - S1319 external link
Research Area
Description Cancer
Biological Activity
Description Costunolide inhibits FPTase with IC50 of 20 μM and also inhibits telomerase with IC50 of 90 μM and 65 μM in MCF-7 and MDA-MB-231 cells.
Targets Telomerase (MCF-7) Telomerase (MDA-MB-231) FPTase
IC50 90 μM 65μM [1] 20 μM [2]
In Vitro Costunolide inhibits the growth and telomerase activity of MCF-7 and MDA-MB-231 cells in a concentration- and time-dependent manner. [1] Costunolide also inhibits the farnesylation process of human lamin-B by farnesyl–proteinttransferase (FPTase), in a dose dependent manner. Continuously treatment of Costunolide for 48 hours will significantly decrease proliferation of human tumor cells (A549, SK-OV-3, SK-MEL-2, XF498 and HCT-1) in a dose-dependent manner. [2] Costunolide induces apoptosis by ROS-mediated mitochondrial permeability transition and cytochrome C release to the cytosol in HL-60 human leukemia cells. [3] A recent study indicates that Costunolide shows significant antifungal activity, including Trichophyton mentagrophytes, T.simlii, T.rubrum, and so on. [4]
In Vivo Costunolide inhibits angiogenic response by blocking the angiogenic factor signaling pathway. In a mouse corneal micropocket assay, Costunolide reduces VEGF-stimulated neovascularization in mice. [5]
Clinical Trials
Features
Protocol
Kinase Assay [1]
Telomerase activity assay The telomerase activity is measured by the TRAP assay using the TRAPez Telomerase Detection Kit, which includes primers of a 36-bp internal control (IC) for quantifying the amplification of telomerase activity within a linear range close to 2.5 logs. For RNase treatment, 10μL of extract are incubated with 1μg of RNase at 37 °C for 20 minutes. The products of the TRAP assay are resolved by electrophoresis in a nondenaturing12% PAGE in a buffer containing 0.5 × Tris–borate EDTA and detected by autoradiograph. For quantification of TRAP products, the dried gels are exposed to Fuji Imaging Plate at room temperature. Results are corrected for background, and a standard value of 100 is given to the untreated control cell signal. Signal intensities of Costunolide-treated cells are compared to the standard and are expressed as a fraction of the maximum value of 100. [1]
FPTase assay FPTase is partially purified from rat brain by ammonium sulfate fractionation and Mono Q column chromatography. A human lamin-B carboxy-terminus sequence peptide (biotin-TRASNRSCAIM) as a substrate of FPTase is supplied. The FPTase assay is performed. Briefly, the standard reaction mixture (25μL) containing [3H]farnesyl pyrophosphate, biotinylated TRANSRSCAIM, partially purified FPTase, reaction buffer and the indicated concentrations of test material is incubated at 37 °C for 20 minutes. The FPTase activity is determined by measuring the incorporation of the [3H]farnesyl group from [3H]farnesyl pyrophoshate into the substrate peptide using a liquid scintillation counter. The 1-HFP (1-hydroxyfarnesyl phosphonate) is used as a reference drug for the enzyme inhibition (IC50 1.0 μM). The FPTase activity is calculated as mean of three distinct experiments. [2]
Cell Assay [1]
Cell Lines MCF-7 and MDA-MB-231 cells
Concentrations 0-100 μM
Incubation Time 48 hours
Methods 1) Plate 500-10,000 cells in 200 μL media per well in a 96 well plate. Leave 8 wells empty for blank controls.2) Incubate (37 °C, 5% CO2) overnight to allow the cells to attach to the wells.3) Add 2 μL of Costunolide dissolved in DMSO to each well. Place on a shaking table, 150 rpm for 5 minutes, to thoroughly mix the samples into the media. 5) Incubate (37 °C, 5% CO2) for 48 hours to allow Costunolide to take effect.6) Make 2 mL or more of MTT solution per 96 well plate at 5 mg/mL in PBS. Do not make a stock as MTT in solution is not stable long-term.7) Add 20 μL MTT solution to each well. Place on a shaking table, 150 rpm for 5 minutes, to thoroughly mix the MTT into the media. 8) Incubate (37 °C, 5% CO2) for 1-5 hours to allow the MTT to be metabolized.9) Dump off the media. (Dry plate on paper towels to remove residue if necessary.10) Resuspend formazan (MTT metabolic product) in 200 μL DMSO. Place on a shaking table, 150 rpm for 5 minutes, to thoroughly mix the formazan into the solvent.11) Read optical density at 560 nm and subtract background at 670 nm. Optical density should be directly correlated with cell quantity.
Animal Study [5]
Animal Models Hydron N containing VEGF are implanted into mouse cornea.
Formulation Costunolide is dissolved in dimethylsulfoxide (DMSO).
Doses 100 mg/kg
Administration Intraperitoneal injection once daily.
References
[1] Choi SH, et al, Cancer Lett, 2005, 227(2), 153-162.
[2] Park SH, et al, Planta Med, 2001, 67(4), 358-359.
[3] Lee MG, et al, Biol Pharm Bull, 2001, 24(3), 303-306.
[4] Duripandiyan V, et al, BMC Complement Altern Med, 2012, 12, 13.
[5] Jeong SJ, et al, Cancer Lett, 2002, 187(1-2), 129-133.

PATENTS

PATENTS

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