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58-98-0 molecular structure
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[({[(2S,3R,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid

ChemBase ID: 3114
Molecular Formular: C9H14N2O12P2
Molecular Mass: 404.161182
Monoisotopic Mass: 404.00219716
SMILES and InChIs

SMILES:
O[C@H]1[C@H](CO[P@@](=O)(O)OP(=O)(O)O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O
Canonical SMILES:
O[C@H]1[C@H](CO[P@](=O)(OP(=O)(O)O)O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O
InChI:
InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7+,8+/m0/s1
InChIKey:
XCCTYIAWTASOJW-ZAKLUEHWSA-N

Cite this record

CBID:3114 http://www.chembase.cn/molecule-3114.html

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NAMES AND DATABASE IDS

NAMES AND DATABASE IDS

Names Database IDs
IUPAC name
[({[(2S,3R,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acid
IUPAC Traditional name
@uridine-5'-diphosphate
Synonyms
Uridine-5'-Diphosphate
CAS Number
58-98-0
PubChem SID
46505736
160966558
PubChem CID
6101632

DATA SOURCES

DATA SOURCES

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Data Source Data ID Price

CALCULATED PROPERTIES

CALCULATED PROPERTIES

JChem ALOGPS 2.1
Acid pKa 1.751743  H Acceptors 10 
H Donor LogD (pH = 5.5) -7.37538 
LogD (pH = 7.4) -8.00681  Log P -2.9606066 
Molar Refractivity 74.3114 cm3 Polarizability 30.312477 Å3
Polar Surface Area 212.39 Å2 Rotatable Bonds
Lipinski's Rule of Five false 
Log P -0.94  LOG S -1.66 
Solubility (Water) 8.89e+00 g/l 

PROPERTIES

PROPERTIES

Bioassay(PubChem)

DETAILS

DETAILS

DrugBank DrugBank
DrugBank - DB03435 external link
Item Information
Drug Groups experimental
Description A uracil nucleotide containing a pyrophosphate group esterified to C5 of the sugar moiety. [PubChem]

REFERENCES

REFERENCES

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PATENTS

PATENTS

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